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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs7865593 chr9:98762815 A/G C9orf130 chr9:98568372-98638259:- 0.56 5.61 8.01E-7 Box Plot
ACC rs78683095 chr16:71142397 G/T TXNL4B chr16:72078188-72128330:- 0.98 5.17 3.79E-6 Box Plot
ACC rs788350 chr20:37064636 C/T LOC388796 chr20:37049239-37064018:- 0.81 5.65 6.88E-7 Box Plot
ACC rs78923624 chr8:71677839 G/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs7924583 chr11:60132047 C/T MS4A14 chr11:60146003-60185229:+ 0.34 5.29 2.49E-6 Box Plot
ACC rs79255172 chr3:93566171 G/A STX19 chr3:93733213-93747454:- 0.77 5.46 1.35E-6 Box Plot
ACC rs7928171 chr11:60133410 G/C MS4A14 chr11:60146003-60185229:+ 0.34 5.46 1.34E-6 Box Plot
ACC rs79395013 chr11:44104701 C/CCT ACCS chr11:44087475-44105772:+ 0.51 5.49 1.23E-6 Box Plot
ACC rs79492119 chr7:72203890 T/A TYW1B chr7:72023729-72298777:- 1.14 6.43 4.07E-8 Box Plot
ACC rs7961416 chr12:9804413 C/G LOC374443 chr12:9786015-9811008:+ 1.12 5.5 1.18E-6 Box Plot
ACC rs796597 chr2:61681060 A/G C2orf74 chr2:61372203-61391964:+ 0.6 5.72 5.33E-7 Box Plot
ACC rs79692819 chr5:112698967 C/T APC chr5:112043195-112181936:+ 0.81 5.1 4.81E-6 Box Plot
ACC rs7974011 chr12:75871753 A/C GLIPR1L2 chr12:75784850-75826468:+ 0.69 5.47 1.3E-6 Box Plot
ACC rs79970014 chr7:97408774 G/A TECPR1 chr7:97843936-97881563:- 0.83 5.45 1.38E-6 Box Plot
ACC rs799916 chr17:41243190 G/T NBR2 chr17:41277627-41305688:+ 0.96 6.32 6.09E-8 Box Plot